CDS

Accession Number TCMCG006C117941
gbkey CDS
Protein Id XP_013645885.1
Location complement(join(5793087..5795218,5797172..5798399))
Gene LOC106350560
GeneID 106350560
Organism Brassica napus

Protein

Length 1119aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013790431.2
Definition NF-X1-type zinc finger protein NFXL1 isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category K
Description NF-X1-type zinc finger protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K12236        [VIEW IN KEGG]
EC -
KEGG_Pathway ko05165        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
GOs GO:0000122        [VIEW IN EMBL-EBI]
GO:0000976        [VIEW IN EMBL-EBI]
GO:0000977        [VIEW IN EMBL-EBI]
GO:0000981        [VIEW IN EMBL-EBI]
GO:0000982        [VIEW IN EMBL-EBI]
GO:0001012        [VIEW IN EMBL-EBI]
GO:0001067        [VIEW IN EMBL-EBI]
GO:0001078        [VIEW IN EMBL-EBI]
GO:0001227        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009636        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009696        [VIEW IN EMBL-EBI]
GO:0009697        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010188        [VIEW IN EMBL-EBI]
GO:0010310        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017000        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0018958        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042445        [VIEW IN EMBL-EBI]
GO:0042446        [VIEW IN EMBL-EBI]
GO:0042537        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044212        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046189        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051193        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072330        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]
GO:1901617        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000377        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGCTCTCAAGTCAGGAGAGATAGGCGTCATCAGAGTTCTCAGCAAACATGGGTGCCTAGAGGTGCTTCTACCCCGGTGGCGGTTGTAAATGAGCCTTCCCATCCTTCTGCTAATAATACAGCCGGAGTTTCAGAAACTGTTGGCCTTGGTGCTGCATCACGTCCTGTTTATCCACAAAGGCAGCATAACGGTTCTGTTCGTCCGTCTTATAATCAGCACCAAAGGAACAATAATGTTGCTGCTACTCCACCTCCACCTAATCGACAGAGAAGAAACAATATTGCTCCGGGAGCAACTCTGCCTGATGATAATCGTCAACGAGTTGGGTCTAGGACCAGGCCTGTGTATCAGGGGAAAAGGGTAGCTAAGGAGGATAACATTGCGTTGACAGACCCGAACTTGCCTCAGCTTGTTCAAGAGATACAAGAGAAGCTGGTGAAGAGTTCTATTGAGTGTATGATTTGTTACGACAAGGTTGGGAGGGCTGCGAATATATGGTCTTGCTCCAGCTGTTACTCTATCTTCCATATGCATTGTATCAAGAAATGGGCTCGAGCACCAACTTCTATTGATTTGTTGGCTGAGAAAAACCAAGGTGATAATTGGAGGTGTCCAGGTTGCCAATCTGTGCAGTTGACGTCGCCAAAAGAGATATGCTATCGGTGCTTTTGTGGGAAGAGGAAAGATCCACCCTCTGATCCATATCTGACACCACACTCATGCGGAGAGCCATGTGGGAAGCCGCTGGAGAAAGAGTTTGCAGCAGCAGCTGAGACGACCACCAGTGAGGATCTTTGTCCTCATATCTGTGTGTTGCAGTGTCATCCTGGTCCATGTCCTCCTTGTAAGGCGTTTGCTCCGCCTCGTAGTTGCCCTTGTGGTAAAAAGACGGTTCATACTAGATGCTCGGAGCGGAGATCTCTTCTTGTTTGTGGGCAGCGTTGCGAGAAGCTTCTCAACTGTGGGCGTCATCAGTGTGAAAAGACATGTCATGTTGGCCCTTGTGATCCTTGTCAGGTACTAGTAAATGCCACATGTTTCTGCAAGAAAAAAGTGGAGACTGTGATTTGCGGAGATATGAATGTGAAGGGAGAGTTAAAAGTAGAAGATGGTGTGTATTCGTGCAATTTGAACTGTGGGAAGCCGCTTGGATGTGGTAATCATTTCTGTTCCGAGGTTTGCCACCCTGGACCTTGCGGAGACTGTGACTTACTGCCCAGTAGAGTTAAGACGTGCTATTGTGGGAAAACGCGTCTAGAAGAACAGACCAGGCAGAGTTGCTTGGACCCAATTCCTTCTTGCTCAAACCTATGCAGTAAGCTTCTTCCTTGTGGATTACATACTTGCAACGAGTTGTGCCATTCAGGTGATTGCCCTCCTTGTTTAGTGCAAGTCAACCAGAAATGCCGGTGTGGTTCGACATCCAGGACTGTGGAATGCTACATAACAACTTCTTCAGAGACGGATAAGTTTGTGTGTTCTAAACCATGTGGGCGTAAGAAGAATTGTGGGAGACATAGATGTAGTGAGCGTTGCTGCCCTCTCTTGAACGCGAAGAAGAATGATCTATCCGGTGATTGGGACGAACACGTATGCCAATTACCTTGTGGGAAGAAGCTAAGGTGCGGGCAGCATTCCTGTGAATCTTTGTGCCATAGTGGCCATTGCCCTCCTTGCCTCGAGATGATATTCACTGATCTAACATGTGCGTGTGGAAATACTTCGATTCCTCCACCACTACCATGCGGGACGCCTGTTCCTAGCTGCCAGCTTCCATGCTCCATTCCTCAGCCTTGTGGCCATTCTGCTACGCATGGATGCCATTTTGGAGATTGCCCTCCTTGTTCTGCCCCAGTGGAAAAGAAATGCGTTGGTGGTCACGTGGTTCTGAGAAACATACCTTGTGGGCTGAAAGACATCAGATGTAACAAGATTTGTGGAAAGACGAGGCGTTGTGGCATGCATGCTTGTGCCAGAACTTGCCACCCGGAGGCATGTGACACTTACAATGAATCTGAAGCAGCTCTGCGTGTTACATGTGGACAGACTTGTAGTGCTCCTAGAAGAGATTGCAGGCACACTTGTGCAGCTCTTTGCCATCCTTCGCAGCCTTGCCCTGACACAAGATGTGAATTTCCAGTCACAATAACATGTTCGTGTGGTCGCATAACCGCTACTGTTCCTTGCGATGCGGGAGGAGGAAGTACCAGCAATCTTAGTGTTGATTCTATCTATGAAGCCTCTGTTTTGCAGAAGCTTCCAACTTCGCTTCAGCCTGTTGAGTCGAATGGAAGCCGAATCCCTCTCGGGCAGCGAAAGCTTTCGTGTGATGATGAGTGTGCTAAACTGGAGCGTAAGCGTGTTCTTCAAGACGCGTTTGATATCACTCCCCCAAATCTGGACTCTTTACATTTTAGCGAGAATGCTGCTATGACAGAGATTATTTCGGACATCTATAGGCGTGATCCTAAGTGGGTACTGGCTGTTGAAGAGCGCTTCAAGTACCTGGTACTTGGGAAGGCTAGAGGAAGCACAAGCACCCTTAAGGTCCATGTATTCTGCCCGATGCAAAAGGATAAACGAGACACGGTTAGACTTCTAGCTGAGAGATGGAAACTTGCGGTTAGCAATGCAGGGTGGGAGCCAAAACGGTTTACAGTGGTCCACGTAACACAAAAGTCAAAACCGCCAACACGAATCATTGGAGCTAGGGGTGGCGCTGTCTCGCTAGGCGGGCCTCACCCACCGTCCTTTGATCCGCTGGTGGATATGGATCCTAGGCTGGTGGTGTCATTACTGGATCTCCCGAGGGAGGCGAATATCAGCGCTTTGGTGCTGAGATTTGGAGGTGAATGTGAGCTTGTTTGGCTGAATGACAAGAACGCTTTGGCCGTGTTCCACGACCATGCCCGAGCCGCCACTGCCATGAGGAGGCTGGACCACGGTTCTGTATACCATGGAGCAGTGGTCGTCCAGAACGGTCAGCAATCTCCATCACTCGGTGGTAATGCATGGGGAAAACTACCTAGCAGCTCATCCTGGGATGTACAGAAAGCAAATCCATGGAAGAAAGCAGTGATTCAGGAGAGTGATGAGAACTGGGGAGCTGAAGATTCCCCCATTGGAGGATCATCTACAGATATTCAAGCCGCTGCGTGGAGATCAGCAACGAGCAACAATCCAGTGGTTACCTCAGTTAACCGTTGGAGTGTACTGGAGCCAGAGACGCCCAACACGTCCGGTTTGCAGCCACTGGTTCGGACAGAAGGGAGCAGCAGTTCAAAAGCTGCAGGTAAACAACCGGTGGAAGGCTCAAGCGAAGAAGTGGTGGATGATTGGGAGAAGGTATGTGAGTGA
Protein:  
MSSQVRRDRRHQSSQQTWVPRGASTPVAVVNEPSHPSANNTAGVSETVGLGAASRPVYPQRQHNGSVRPSYNQHQRNNNVAATPPPPNRQRRNNIAPGATLPDDNRQRVGSRTRPVYQGKRVAKEDNIALTDPNLPQLVQEIQEKLVKSSIECMICYDKVGRAANIWSCSSCYSIFHMHCIKKWARAPTSIDLLAEKNQGDNWRCPGCQSVQLTSPKEICYRCFCGKRKDPPSDPYLTPHSCGEPCGKPLEKEFAAAAETTTSEDLCPHICVLQCHPGPCPPCKAFAPPRSCPCGKKTVHTRCSERRSLLVCGQRCEKLLNCGRHQCEKTCHVGPCDPCQVLVNATCFCKKKVETVICGDMNVKGELKVEDGVYSCNLNCGKPLGCGNHFCSEVCHPGPCGDCDLLPSRVKTCYCGKTRLEEQTRQSCLDPIPSCSNLCSKLLPCGLHTCNELCHSGDCPPCLVQVNQKCRCGSTSRTVECYITTSSETDKFVCSKPCGRKKNCGRHRCSERCCPLLNAKKNDLSGDWDEHVCQLPCGKKLRCGQHSCESLCHSGHCPPCLEMIFTDLTCACGNTSIPPPLPCGTPVPSCQLPCSIPQPCGHSATHGCHFGDCPPCSAPVEKKCVGGHVVLRNIPCGLKDIRCNKICGKTRRCGMHACARTCHPEACDTYNESEAALRVTCGQTCSAPRRDCRHTCAALCHPSQPCPDTRCEFPVTITCSCGRITATVPCDAGGGSTSNLSVDSIYEASVLQKLPTSLQPVESNGSRIPLGQRKLSCDDECAKLERKRVLQDAFDITPPNLDSLHFSENAAMTEIISDIYRRDPKWVLAVEERFKYLVLGKARGSTSTLKVHVFCPMQKDKRDTVRLLAERWKLAVSNAGWEPKRFTVVHVTQKSKPPTRIIGARGGAVSLGGPHPPSFDPLVDMDPRLVVSLLDLPREANISALVLRFGGECELVWLNDKNALAVFHDHARAATAMRRLDHGSVYHGAVVVQNGQQSPSLGGNAWGKLPSSSSWDVQKANPWKKAVIQESDENWGAEDSPIGGSSTDIQAAAWRSATSNNPVVTSVNRWSVLEPETPNTSGLQPLVRTEGSSSSKAAGKQPVEGSSEEVVDDWEKVCE